Publications

Peter Brazda, Cristian Ruiz-Moreno, Wout Megchelenbrink, Henri J L M Timmers, Hendrik G Stunnenberg (2022). Extensive patient-to-patient single nuclei transcriptome heterogeneity in pheochromocytomas and paragangliomas. bioRxiv.

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Yanan Zhai, Prashant Singh, Anna Dolnik, Peter Brazda, Nader Atlasy, Nunzio del Gaudio, Konstanze Döhner, Hartmut Döhner, Saverio Minucci, Joost Martens, Lucia Altucci, Wout Megchelenbrink, Lars Bullinger, Hendrik G. Stunnenberg (2022). Longitudinal single-cell transcriptomics reveals distinct patterns of recurrence in acute myeloid leukemia. bioRxiv.

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Hendrik G Stunnenberg, Cristian Ruiz-Moreno, Farid Keramati, Peter Brazda, Wout Megchelenbrink, Brigit te Pas, Kim Boshuisen, Helena C Besse, Lennart Kester, Mariette Kranendonk (2021). Reprogramming of pro-tumor macrophages by hydroxychloroquine in an abdominally metastasized diffuse midline glioma. medRxiv.

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Johanna F Dekkers, Maria Alieva, Astrid Cleven, Farid Keramati, Peter Brazda, Heggert G Rebel, Amber KL Wezenaar, Jens Puschhof, Maj-Britt Buchholz, Mario Barrera Román, Inez Johanna, Angelo D. Meringa, Domenico Fasci, Maarten H. Geurts, Hendrikus C.R. Ariese, Esmée J. van Vliet, Ravian L. van Ineveld, Effrosyni Karaiskaki, Oded Kopper, Yotam E. Bar-Ephraim, Kai Kretzschmar, Alexander M.M. Eggermont, Ellen J. Wehrens, Henk G. Stunnenberg, Hans Clevers, Jürgen Kuball, Zsolt Sebestyen, Anne C. Rios (2021). Behavioral-transcriptomic landscape of engineered T cells targeting human cancer organoids. bioRxiv.

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Nader Atlasy, Anna Bujko, Peter Brazda, Eva Janssen-Megens, Espen S Bækkevold, Jørgen Jahnsen, Frode L Jahnsen, Hendrik G Stunnenberg (2019). Single cell transcriptome atlas of immune cells in human small intestine and in celiac disease. bioRxiv.

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Bálint Rehó, Lukas Lau, Gábor Mocsár, Gabriele Müller, Lina Fadel, Peter Brazda, Laszlo Nagy, Katalin Toth, Gyorgy Vamosi (2019). Simultaneous mapping of molecular proximity and comobility reveals agonist-enhanced dimerization and DNA binding of nuclear receptors. Analytical chemistry.

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Roberta Martinelli, Gurdyal S. Besra, Petr A. Illarionov, Istvan Szatmari, Peter Brazda, Mary A. Allen, Wenqing Xu, Xiang Wang, László Nagy, Robin D. Dowell, Graham A. W. Rook, Laura Rosa Brunet, Christopher A. Lowry David G. Smith (2019). Identification and characterization of a novel anti-inflammatory lipid isolated from Mycobacterium vaccae, a soil-derived bacterium with immunoregulatory and stress resilience properties. Psychopharmacology.

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Peter Brazda, Charl Moolman, Jacob Kerssemakers, Belen Solano, Nynke Dekker Roy de Leeuw (2017). Measuring In Vivo Protein Dynamics Throughout the Cell Cycle Using Microfluidics. The Bacterial Nucleoid: Methods and Protocols (Methods in Molecular Biology).

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Peter Brazda (2014). Determination of dynamic properties of nuclear receptors. PhD Thesis.

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Jan W Krieger, Agata Pernus, Peter Brazda, Jörg Langowski (2014). Protein Interaction and Transport Maps of Live Cell Nuclei Using Fluorescence Correlation Spectroscopy in a Single Plane Illumination Microscope. Microscopy and Microanalysis.

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Peter Brazda, Jan Krieger, Bence Daniel, David Jonas, Tibor Szekeres, Jörg Langowski, Katalin Toth, Laszlo Nagy, Gyorgy Vamosi (2014). Ligand binding shifts highly mobile retinoid X receptor to the chromatin-bound state in a coactivator-dependent manner, as revealed by single-cell imaging. Molecular and cellular biology.

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P Brazda, B Reho, J Krieger, K Toth, L Nagy, G Vamosi (2013). Activation enhances DNA-binding of RXR but not the number of binding sites as shown by FCS/ChIP-seq. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS.

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Katalin Toth, Zsolt Sarang, Beáta Scholtz, Peter Brazda, Norbert Ghyselinck, Pierre Chambon, László Fésüs, Zsuzsa Szondy (2011). Retinoids enhance glucocorticoid-induced apoptosis of T cells by facilitating glucocorticoid receptor-mediated transcription. Cell Death & Differentiation.

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Peter Brazda, Tibor Szekeres, Balazs Bravics, Katalin Toth, Gyorgy Vamosi, Laszlo Nagy (2011). Live-cell fluorescence correlation spectroscopy dissects the role of coregulator exchange and chromatin binding in retinoic acid receptor mobility. Journal of cell science.

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Peter Brazda, Tibor Szekeres, Balazs Bravics, Katalin Toth, Laszlo Nagy, Gyoergy Vamosi (2011). Dissecting the role of coregulator exchange and chromatin binding in retinoic acid receptor (RAR) mobility by live cell FCS. EUROPEAN BIOPHYSICS JOURNAL WITH BIOPHYSICS LETTERS.

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Balint L Balint, Ophir Keret, Peter Brazda, Mate Demeny, others (2010). Building Protein Domain Based Composite Biobricks for Mammalian Expression Systems.

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Gy Vamosi, P Brazda, T Szekeres, T Domoszlai, A Horvath, K Toth, S Damjanovich, L Nagy (2009). Nuclear receptor activation viewed via mobility. ACTA PHYSIOLOGICA HUNGARICA.

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Gyorgy Vamosi, Nina Baudendistel, Claus-Wilhelm Von der Lieth, Nikoletta Szalóki, Gábor Mocsár, Gabriele Müller, Peter Brazda, Waldemar Waldeck, Sándor Damjanovich, Jörg Langowski, others (2008). Conformation of the c-Fos/c-Jun complex in vivo: A combined FRET, FCCS, and MD-modeling study. Biophysical journal.

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Peter Brazda, Tibor Szekeres, Balazs Bravics, Katalin Toth, Laszlo Nagy, Gyorgy Vamosi (2007). A transzkripciós szabályozás dinamikus arca / The dynamic face of transcriptional regulation. Biokemia (in Hungarian).

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Istvan Szatmari, Gyorgy Vamosi, Peter Brazda, Balint L Balint, Szilvia Benko, Lajos Széles, Viktoria Jeney, Csilla Özvegy-Laczka, Attila Szántó, Endre Barta, others (2006). Peroxisome proliferator-activated receptor γ-regulated ABCG2 expression confers cytoprotection to human dendritic cells. Journal of Biological Chemistry.

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P Brazda, S Benko, L Nagy (2005). Characterization of a novel retinoid-x receptor antagonist, LG1208: K3-011P. The Febs Journal.

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